BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016C10SP1|AL426987
(828 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig868 1612 0.0
>3x_Contig868
Length = 3693
Score = 1612 bits (810), Expect = 0.0
Identities = 822/828 (99%), Gaps = 1/828 (0%)
Strand = Plus / Plus
Query: 1 aaatgctataagactaaactttgggggtatgagaagaacaagaacgttagagatttggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 aaatgctataagactaaactttgggggtatgagaagaacaagaacgttagagatttggtc 1016
Query: 61 tataggttttccaataattattggagaaatggcccggaccacatagtcgataaattagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 tataggttttccaataattattggagaaatggcccggaccacatagtcgataaattagac 1076
Query: 121 tattctagatgcaaatccgtatcattcagaaacatatccggagacagtctaacattatcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1077 tattctagatgcaaatccgtatcattcagaaacatatccggagacagtctaacattatcg 1136
Query: 181 cgtgaaacaagcaacgagaaagtcgatactgatgatttaacagagacggaaaaggaaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 cgtgaaacaagcaacgagaaagtcgatactgatgatttaacagagacggaaaaggaaaag 1196
Query: 241 aataatttggtactatcgtcgttgttagacaactttgatttcgataaaccgctagccgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1197 aataatttggtactatcgtcgttgttagacaactttgatttcgataaaccgctagccgtt 1256
Query: 301 gaagaagtgacagcagaagaagaagaagagaatgctggtgcagattatgagtatgaaggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1257 gaagaagtgacagcagaagaagaagaagagaatgctggtgcagattatgagtatgaaggt 1316
Query: 361 ctatacagggaatctgacagcaaaccgttgttttcttcgagtatctcawaagawattcca 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 1317 ctatacagggaatctgacagcaaaccgttgttttcttcgagtatctcaaaagaaattcca 1376
Query: 421 cgggtcaaagagggtgagttttctwaaacggagaatacaacagcaacgtcatatgtwgaa 480
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 1377 cgggtcaaagagggtgagttttctaaaacggagaatacaacagcaacgtcatatgtagaa 1436
Query: 481 gatgaagaagctgacaaggaacaagacatggacagcgaggaggatgaatttattccaacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1437 gatgaagaagctgacaaggaacaagacatggacagcgaggaggatgaatttattccaacc 1496
Query: 541 tttggcgctactccacaagtgccagataattcaactgaaaatactacgaatcctactgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1497 tttggcgctactccacaagtgccagataattcaactgaaaatactacgaatcctactgaa 1556
Query: 601 gttctcagagatttattgaatccccttgaacctacatcattcaagttgattgaggaatcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1557 gttctcagagatttattgaatccccttgaacctacatcattcaagttgattgaggaatcc 1616
Query: 661 gacgaagacattgatcatcagagagatgtacaggaggaacaagtggcattaccaatacct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1617 gacgaagacattgatcatcagagagatgtacaggaggaacaagtggcattaccaatacct 1676
Query: 721 gaagttattattccacagaaatcgaataacccactgttttttctacacaaggattctccg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1677 gaagttattattccacagaaatcgaataacccactgttttttctacacaaggattctccg 1736
Query: 781 ttttttggtgggtcagactaagattgcgaaaataaarccacctattgc 828
||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1737 -tttttggtgggtcagactaagattgcgaaaataaagccacctattgc 1783
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7457
Number of Sequences: 1807
Number of extensions: 7457
Number of successful extensions: 251
Number of sequences better than 1.0e-20: 1
length of query: 828
length of database: 10,358,551
effective HSP length: 16
effective length of query: 812
effective length of database: 10,329,639
effective search space: 8387666868
effective search space used: 8387666868
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)